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Dimension reduction of single cell data with corral4 years ago
Introduction | Loading packages and data | corral on r Biocpkg('SingleCellExperiment') | corral on matrix | Updates to CA to address overdispersion | Changing the residual type (rtype) | Variance stabilization before CA (vst_mth) | Power deflation (powdef_alpha) | Trimming extreme values (smooth mode) | Visualizing links between features and sub-populations with biplots | Session information | References
Alignment & batch integration of single cell data with corralm5 years ago
Introduction | Loading packages and data | corralm on a single r Biocpkg('SingleCellExperiment') | corralm on a list of matrices | Scaled variance plots to evaluate integration | Session information | References